rs248938677 SNP Detail

Summary

• ID
  rs248938677
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:76495742 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCAAGTCAG GCTAAGTAAG
  ACGCTGTCTC AAAACAAAAG AATAATAATA GTAAATAAAA AATTAATAGC TTGCATCTAG
  AAATTCTGGT TGTAAATGTT TCTACCCCAG TTTAGCACAA AGTATATATG TATAGTGGCT
  AAGTTGTATT TGTCCTTTTG CTTAAAAAAT AAAATATTGC CTGAATGAAA TTCATACCCA
  S
  TCCTCCCTCC AACGCAGTAG AGCCAAGTTT GCCATTGTCC TCTGAAAGCT GAGAACACCA
  GGGCCTGCAG GAGAGCAGGT CTACAAGAGT TCAGAAGCCT GGTGTGTTGC TTGGTTTTGC
  CAACTTCATA CAAATCTAGA GAATCTGAAA AGAAGGAACC TCCACTGAGG AATTACCTCC
  ATCAAATTGG CCCGTAGACA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323753536	CHEV_11_76418418	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs248938677					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:76495742 () rs orientation: forward

Symbol	Name	Function Class
Tssr109299	transcription start site region 109299	277 bp upstream