CGCCCCCTTC TGGTGCGTCT GAAGACAGCT ACAGTACTTA TGTATAATAA TAAATAAATC TTCAAAAAAA AAAAAACCAA AAACCAAAAA CAAACAAACC AACCTGTGGT TCCTGACCCT CTTCCCCCCT CACAGAGGTC TTCCCCCCTC TCTCACAGAG GTCTTCCTCC CTCTCATCCC TGGCAGCTTG GTAGGATGCA R GCACTATCCT GAGCTAAGAG GTCTGGGCAT CAGCTACATA GTGAGATATG CTCTTGAGAC AGCTCCCAAG TTAGATGGCA CCCGAAATCT AGAGAGGTTC TGCCTGTAGC AGCCGGACTG TGGCTCTGTG ATAGCCTCTG TCATCTATAT GCCAGTAGAG AGGCATCTCG GAGTGGCAGG TGTCAGGGTT CTCAGCACAG R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | LG/J |
SM/J |
---|---|---|---|---|---|---|---|
ss324170098 | CHEV_12_113914299 | CHEVERUD | SCREENING_POP | f | SNP | A | G |
SNP Consensus Information | |||||||
SNP | Consensus Type | LG/J |
SM/J |
||||
rs249002317 | SNP | A | G |
Location: Chr12:112642522 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Akt1 | thymoma viral proto-oncogene 1 | 1256 bp upstream | ||||||
Cpgi5173 | CpG island 5173 | 1179 bp distal | ||||||
Gm30150 | predicted gene, 30150 | 118 bp downstream | ||||||
Rr369631 | regulatory region 369631 | 549 bp downstream | ||||||
Tssr115391 | transcription start site region 115391 | 1665 bp downstream | ||||||
Tssr117879 | transcription start site region 117879 | 1813 bp upstream | ||||||
Tssr117880 | transcription start site region 117880 | 1721 bp upstream | ||||||
Tssr117881 | transcription start site region 117881 | 1703 bp upstream | ||||||
Tssr117882 | transcription start site region 117882 | 1324 bp upstream | ||||||
Tssr117883 | transcription start site region 117883 | 1274 bp upstream | ||||||
Tssr117884 | transcription start site region 117884 | 1251 bp upstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/10/2024 MGI 6.24 |
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