rs249042446 SNP Detail

Summary

• ID
  rs249042446
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:39369549 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    tttcagttt caatattatt tacaaatatc
  tttatctttg gcctctgatc atCtatagag agaatttctt gtgtactgta tggattcagc
  acctgtcaag aaatgcttat tggcctatat gcttaggcaa gaattagaag gtggaacatc
  Y
  aggaaagaaa ttgaattttg gaatggagag atatgtagga aatttaccgg ggaacatggg
  ggaagtcgga agcatggagg taagcagaga taaccagcca tttgacagaa cttaggctag
  aataatgggt taataattca tgagctagtc                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320228527	CHEV_2_39335057	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs249042446					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:39369549 () rs orientation: forward

Symbol	Name	Function Class
Rr373076	regulatory region 373076	within coordinates