rs249077264 SNP Detail

Summary

• ID
  rs249077264
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:24909006 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CGGGG TCTGAGCCCT GCCCTGGATC
  Y
  TTCCCACTCG CTCTCCCCCG TATGA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325333037	CHEV_17_24826977	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs249077264					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:24909006 () rs orientation: forward

Symbol	Name	Function Class
Cpgi8738	CpG island 8738	within coordinates
Rr339325	regulatory region 339325	within coordinates
Syngr3	synaptogyrin 3	83 bp upstream
Tssr146762	transcription start site region 146762	145 bp upstream
Tssr146763	transcription start site region 146763	72 bp upstream