rs249087051 SNP Detail

Summary

• ID
  rs249087051
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:84353814 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTTAATTT CTGATCTCCT
  GAGAGTTGGG CATATCCTAT CTCTGACTCA TTCAGTCAAA CCCTTCTCTG ATTCATCACT
  TTGTCTGCCC CTCAATTAGA CCTGACTTTC AAACATGACT GCTTCCTTCT AAAAACTGTG
  TGTCCTAAGG GCCTAGCTAT ATGCCAGCTA GAGAAATTAA AAGTCTATGG CATGCCTGCA
  T
  TCCAGATGGA TCAATCACAC AGACCTTGAA GGTCTTTGGA TGTGATCCCT TGCCAGAGCA
  GCCATATTGC TGGATTAAAA TTCCTCTACA AAATCAAAAT TAAAGAAGAA AAGGCATTTT
  TCATGTTCTT TCCTGGGAGG AGCTTAGACA AATGGCCAAT GACCAGAAGT CAATGTCGGA
  AGTCATAAGA CCACACATGG                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325260792	CHEV_16_84557171	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs249087051					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:84353814 () rs orientation: forward

Symbol	Name	Function Class
Gm32073	predicted gene, 32073	1356 bp upstream
Rr518505	regulatory region 518505	1327 bp proximal
Rr518506	regulatory region 518506	1428 bp proximal
Tssr139145	transcription start site region 139145	223 bp upstream