rs249106996 SNP Detail

Summary

• ID
  rs249106996
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:20412587 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTCAT AAAGGCAATA CTCTAGTGCT
  Y
  ACCTTAGTTT ATACTTCTCT GGAAT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325739961	CHEV_19_20509713	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs249106996					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:20412587 () rs orientation: forward

Symbol	Name	Function Class
D19Mit23	DNA segment, Chr 19, Massachusetts Institute of Technology 23	674 bp proximal
Gm32689	predicted gene, 32689	within coordinates
Rr356916	regulatory region 356916	187 bp distal
Rr356917	regulatory region 356917	1814 bp proximal
Rr361508	regulatory region 361508	1827 bp proximal
Rr364130	regulatory region 364130	317 bp distal