rs249157860 SNP Detail

Summary

• ID
  rs249157860
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:116205868 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAGCCAAAA AAAACAAAGT
  TGGATTGTTT CTTTTTAAAG CTTTCTATGA GCCCATGCAT GCCTTTTAGC CGTGTTCATA
  CGTCTCACAC AGAGTCTAGC CTTGTTTCAG ACTCAACGTG CAGAAAACAA GTTTTCTGGG
  GCCCCCTCCC ACTGCACGTT TGGGCTCATA GCAGATCAGG ATGCAAATGG TAGTCAGAGG
  K
  AAATGCACTG ACCCCACCAT GCGCAGGACC AAGAACGTAC TCAGTCAAGG CCGGATCTCA
  CCTGACCGGG CCCTTTAATC TTTAGAAAGC TGCTCTGAAT CAGAGAACTG CTTAGTCGGA
  TGTATTTATA ATTACATAAT TATGATCAGT CCATTCATTA AGACAGAAAC ACGGGTTCAT
  TTTCACAAAG TCTAATGGTA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320894894	CHEV_3_116115137	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs249157860					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:116205868 () rs orientation: forward

Symbol	Name	Function Class
Cdc14a	CDC14 cell division cycle 14A	within coordinates
Rr70202	regulatory region 70202	within coordinates
Rr78756	regulatory region 78756	669 bp distal
Rr78757	regulatory region 78757	1784 bp proximal