rs249251112 SNP Detail

Summary

• ID
  rs249251112
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:36076572 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ttattttat tttattttat tttattttat
  tttattttat ggcaggttct cctgtatccc aggttagcct caaacttgat atgaagttga
  ggatggtttt gaacttctga tcgtcctgcc tctacctctt gggtattgga attactgatt
  Y
  gagccgcagc ctctccccgt ttatgtggta ccagcagtga cactctgggc tttgtgcatg
  tgaggcaaac tccctaccca ctgagccaca tccccagcTT ATTTAATCTT ATGttctgta
  gaactggaaa ctgaacttag ggccttgcac                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325584126	CHEV_18_36103173	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs249251112					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:36076572 () rs orientation: forward

Symbol	Name	Function Class
Gm56493	predicted gene, 56493	within coordinates
Rr536031	regulatory region 536031	1111 bp distal
Rr536032	regulatory region 536032	1561 bp distal
Rr536033	regulatory region 536033	309 bp distal
Tssr150585	transcription start site region 150585	1110 bp downstream