rs249259826 SNP Detail

Summary

• ID
  rs249259826
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:136326735 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AGCCCTCAA CAGATTACAA AATGCCCTCA
  TGCCATTGCT GATCCCTAAT CATATGACAT CTTGGTGGCT TCTGTACATT CTGAGTTTAG
  TTCTTCTGAA ATAACAAAAT GGAGGGCAGG GAGGATTGAG GGTTATCAGG GTctctctcc
  Y
  cccctcccct cctctcctcc ctccctccct ccctTTCCAA CACAGAAATG GTCCCAGCTT
  GATACTCCAT TTGATTTGTG TTGAAACACC AATTAATATG TTTTTCTTTC TTTTTTCTTT
  TTTTCTTGGA TCTCATTCTG CAGTTAGTAT                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320519126	CHEV_2_136310551	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs249259826					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:136326735 () rs orientation: forward

Symbol	Name	Function Class
Gm32546	predicted gene, 32546	within coordinates
Rr565839	regulatory region 565839	799 bp proximal
Rr565840	regulatory region 565840	1091 bp proximal
Rr565841	regulatory region 565841	1116 bp proximal