CTTCCCCTCA CCCTGGCCGG GATGAAGCAG GCACATCCGA CCCCTTGGAG GAAGTTTTTT CCGGCGTGCT CTCTGTCGCC ACCTGGTGGT GACAGAGAAG AATGCGGTCA TCGTGACCGT TCGATTTTCC TTTTTTCAAA TGACACTTGT TTTTGGTTTT TGATACTTTT TAAAAGAATC TACGTGCACA TTCATTTTTC T TTTATTATCA TTGATGGCTC ACCACTCTTT GCATATGTGT GAACCCAGAA TATGTCAACC TATATATACA TTAAAGTGGT TTCAATTTTA AGATTGTAAT CAATTTATAA AGGGTGGTTA AAGCTACTGT CACAACTTGA CCACACTGTA GAAAGTCCAA ATATAAGGTA TTTTCTTAGT ATAAGAAATG AAGTAAGACA T = T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | C57BL/6J |
C57L/J |
---|---|---|---|---|---|---|---|
ss370610684 | MGP_WTSI_7_7231340 | EVA_MGPV3 | EVA_MGPV3 | f | SNP | T | T |
SNP Consensus Information | |||||||
SNP | Consensus Type | C57BL/6J |
C57L/J |
||||
rs249270871 | SNP | T | T |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss370610684 | MGP_WTSI_7_7231340 | SC_MOUSE_GENOMES | SC_MOUSE_GENOMES | f | SNP | A/T |
Location: Chr7:7281628 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Cpgi18306 | CpG island 18306 | 76 bp distal | ||||||
Gm45844 | predicted gene 45844 | 340 bp upstream | ||||||
Tssr64464 | transcription start site region 64464 | 629 bp downstream | ||||||
Tssr70610 | transcription start site region 70610 | 584 bp upstream | ||||||
Tssr70611 | transcription start site region 70611 | 543 bp upstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/10/2024 MGI 6.24 |
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