rs249271099 SNP Detail

Summary

• ID
  rs249271099
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:126628385 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGTA CCCCACTGTC TACAATACTA
  K
  AGGACAAGCA TCTAGGGCTT CTTCA                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322451018	CHEV_7_134172727	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs249271099					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:126628385 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19727	CpG island 19727	1033 bp distal
Gm31749	predicted gene, 31749	within coordinates
Kif22	kinesin family member 22	within coordinates
Rr370584	regulatory region 370584	1491 bp downstream
Rr381451	regulatory region 381451	310 bp upstream
Rr655675	regulatory region 655675	1699 bp distal
Rr655676	regulatory region 655676	1211 bp distal
Tssr74928	transcription start site region 74928	1084 bp upstream