rs249280902 SNP Detail

Summary

• ID
  rs249280902
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:73258733 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTTTAATGA TTTTTCTATT
  CACTATGTGC ATAGACTTCC TGAAAATTCC ATAGAGACAT CCACAAAGAA TTCCCTTTAA
  ACTAACCCAC TTAAATGTGA TAGTCCTTTA CAGTAGACAA TGAGGGGCAC AGTTTTATAG
  GCATCTACCA CCTCTAACTG AAGACTTAAG AAGACCTTTC TGCACTGAAG GAAGTTAGGG
  R
  ATAGGAGCTG CAGAGCTTAC CAGAAAGTCA AGCCATAAAA ACGTAAAAAC AGAGCTGTAC
  AGAGCAGTCC GAAAATAATG TGAGAAAAAA AATCTTTAGA TATAGGGGAA TAACCTTATA
  TGCTAGATTG ATGATAATAA TTCTGTATTG TATAATCCCT TCCTCAAGGG TATTCTCTGC
  TCTGCAGCCT GTTATGGAAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325246926	CHEV_16_73462090	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs249280902					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:73258733 () rs orientation: forward

Symbol	Name	Function Class
Gm18825	predicted gene, 18825	1962 bp downstream
Rr518000	regulatory region 518000	752 bp proximal