rs249398624 SNP Detail

Summary

• ID
  rs249398624
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:101125658 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGCCAGAGC ATGCAGTGAT
  GGCTGAGATC ATGGCCAACT CTGTGATCCC CTTCCATAGA GCAGAGGGCA CAGAGGAACC
  TTTGCTCATG GAATCCCAGT GGGGAGTAAG CAGAGAGCAG GTCTCAGAAG CCAGTGCAGA
  GGGGCTGAGG GGTGAGGGGC TGGAGAAGGA GAAGCAGAAG GGATGAGGCC TGCAACTCCA
  R
  CTTCACAGAC TATGACACCC TCTCCTAGCT CCCTTGACCA CACACACACA CACACACACA
  CACACACAGA GAGATACATA AATAAAAACA AAGTAAATAT TTAAAAGAAG ACACTCTTAG
  AAGGCAGTGA TGATTACCGT GCCTGCTTTA TAAAAGACTC AAATGAATAA TAAGAAGAAC
  TACGTGCAAT GTCTAACAAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320851471	CHEV_3_101022265	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs249398624					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:101125658 () rs orientation: forward

Symbol	Name	Function Class
Gm65590	predicted gene, 65590	within coordinates
Rr581978	regulatory region 581978	1735 bp proximal