rs249411557 SNP Detail

Summary

• ID
  rs249411557
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:132015070 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    aaaatattc aactcagtat tgactttttt
  ttttaaagat ttgtttattt tatgtatatg agtagaccac tgctctcttc agacacacca
  gaagaggtca tcagatccca ttacagatgg ttgtgagcca ccatgtggtt gctgggaatt
  K
  aactcaggac ctctggaaga gcagtcggtg ctcttcaccg ctgagccatc tttccagccc
  ggtatagaca tttttttaaa ccaaaataat ttataataaa tgccttttag atatatgtga
  tactaaagct aaaagtaata tgcattcaat                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321332177	CHEV_4_131843674	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs249411557					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:132015070 () rs orientation: forward

Symbol	Name	Function Class
Rr85799	regulatory region 85799	270 bp distal
Rr102689	regulatory region 102689	1070 bp distal
Rr102690	regulatory region 102690	1131 bp proximal
Taf12	TATA-box binding protein associated factor 12	within coordinates