rs249423542 SNP Detail

Summary

• ID
  rs249423542
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:82924037 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CGGTGACCA CACCATCCCA AACAGTGGGT
  CATCTGATTC AGCAATTACT CAATTTGCAT GTGGACATCC TTATCAATAA CTCATTTCAT
  GCTATATTTT CCATTTTTGC TTTGGGTATG TTGACCTAGT TCCGACTAAT TGCTTCTTAA
  Y
  ACATCATAGA TAAGTCATTT GCCTACTGTT TCTATTTAAC Ttgataatta ataatagaaa
  taataataat aattatgaca aCTTGGGGGG TCACTTTGAA CTGAGCTTTT CTGTTTCTAC
  CTCTTTTGTA GGGCAACTTC AAGTGATCCA                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323044204	CHEV_9_82935591	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs249423542					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:82924037 () rs orientation: forward

Symbol	Name	Function Class
Gm39383	predicted gene, 39383	within coordinates
Rr401563	regulatory region 401563	1833 bp upstream