rs249474484 SNP Detail

Summary

• ID
  rs249474484
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:44054062 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    atacatata tgtgtgtata tatatatata
  tatatatGGT TTTGTCTGTA AATTTGCAAA TTTTTCCTTT TATATGTGTG TTAGAAAAAT
  AAAGTGTTAT TGTTCCAAAA GCATGATGCT GTGTTCCATT CATTATGAAG GGACAGACCT
  R
  GGGCTTCCAA AACTATAGGT GTTTTCAGAG AGGGACAGGC TCCCAGAAGT CTGCCCTTAC
  CTCTAGAGTA TCCATAGCTG GCAGCATGCT ACTAAATGCT AGCTAGCGTC TCTGCCCCCT
  CCTGTGTGCC CTATTCACCT GCATCACTGC                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322940208	CHEV_9_43950848	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs249474484					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:44054062 () rs orientation: forward

Symbol	Name	Function Class
Cbl	Casitas B-lineage lymphoma	211 bp downstream
Mcam	melanoma cell adhesion molecule	38 bp downstream
Rr383290	regulatory region 383290	1412 bp downstream
Rr677565	regulatory region 677565	1356 bp proximal
Rr677566	regulatory region 677566	1683 bp proximal
Rr677567	regulatory region 677567	1776 bp proximal
Tssr89112	transcription start site region 89112	1762 bp downstream
Tssr89113	transcription start site region 89113	1948 bp downstream