rs249480941 SNP Detail

Summary

• ID
  rs249480941
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:131709951 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGTTATCAC TACCTTTGCT
  TTGTGAAGAT CAACTCCATA CATGGACAAC TTTTTGGCAT TCTCAAGAAA TTCCAAGTCA
  GCCTGAGCTG GAGTCATGGA CCTTTGACAG AATAAAAACA GAAAACTCAG TGCCTCAGCA
  AAAGAATTTA TGGTAATAAC AACAGAATAT TCATTATCCT TTATATAAAA ACACACATAC
  R
  CACATTTTTG AATCCTCAAC ATAATTACGG GATGAGAATC TTCCTACTAT CTGAGCCTAA
  ATAACTGAAA TATGACTTAG AAAACAGTTA AAAAAAAAAA AAAGGCAAGA AGACATCAAA
  AAGCTCTCAG AAAAGCAAAC TCTTAATCCG ACGGTTTCCT TCAAGCTCCC ACACCCAGCA
  AGAATTCTGC ACGCCTCTTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321329612	CHEV_4_131538555	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs249480941					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:131709951 () rs orientation: forward

Symbol	Name	Function Class
Epb41	erythrocyte membrane protein band 4.1	within coordinates
Rr600833	regulatory region 600833	674 bp distal
Rr600834	regulatory region 600834	521 bp distal
Rr600835	regulatory region 600835	124 bp proximal
Tssr43622	transcription start site region 43622	86 bp downstream