rs249488892 SNP Detail

Summary

• ID
  rs249488892
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr18:42065101 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGCAACAAA TACAACACTT
  AAAGATTCCA CTGAGAGAAT CCACTCACAT ATCACATTAG AGTCATATGT AGAGGACATA
  CAACTCACTC ACGTATCACA TTAGAGTCAT CTATAGAGGA CATACATCTC ATGGGTATTA
  ATTATACTCG CCTTTACAAG AAAGAGAAAC TAGATACCAT CAGCGTGTCT GCCACAGAGG
  Y
  AGGGACTAAA TAAAACGTAG TGAAGTTGAA TGCCGTGCAG AGGAAGCAGC TAGCTCTCTG
  TATATCAAAT AGGTAAAACT CAGTAGCAGT CGAGTAAACA TAAAAGATAA GTGCACAAAA
  ACTCAGGCAA TGCAAAAGCA CAAGTGTAAA AAAAGATATA CAAACTAAGC AAGGTAGGTG
  AGTCTGTGTA CGAGCATCTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325596246	CHEV_18_42091690	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs249488892					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:42065101 () rs orientation: forward

Symbol	Name	Function Class
D18Mit104	DNA segment, Chr 18, Massachusetts Institute of Technology 104	483 bp proximal
Prelid2	PRELI domain containing 2	Intron