rs249509299 SNP Detail

Summary

• ID
  rs249509299
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:56499161 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GAATACTGC TGCTTTCTAG GGGCCAAAGT
  TCACACTTCA CAGCATCTTA TTTCTTCAGG CCTCCCCACT GGCTTTCATT CCTAGATGTA
  GGTGCTGGCC TTCCAGAAAG CAGAGTGCCC AGTGGCTCAT CCTTGAACAC TGGGGAACCA
  Y
  TAGAGCCCTG TGAAGCACTG AGTTAGAGGA AGAGACCAAG TAGCTAGGGA CAAGCAAAAT
  CACTTGTTCT GAGGACAGCA ATTCCATCTA CTCGGGGGTC ATAAACACCT AGGCTTCTTT
  GATGACTGAG TTTGGGGTGA GGGGAAAGCC                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324645039	CHEV_14_56880541	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs249509299					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:56499161 () rs orientation: forward

Symbol	Name	Function Class
Gzmb	granzyme B	within coordinates
Rr295614	regulatory region 295614	465 bp proximal
Tssr128924	transcription start site region 128924	468 bp downstream
Tssr128925	transcription start site region 128925	513 bp downstream
Tssr128926	transcription start site region 128926	529 bp downstream