rs249535348 SNP Detail

Summary

• ID
  rs249535348
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:69817341 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TGTTTTATT ATTGTTTAAT GATTTCTAAC
  ATTGGCACTT AGCATCTTTT TTTTTCCAAA TAATATTTGA TAGTTgctac tttccttgtt
  cttatggaaa aacacgggac gaaaagcagt gtacaggaag aaggatttat tttggcttgc
  R
  gtttgaaggg atccagtcca cagtggcagg agtatgatat agctgacacc atggcagtca
  gaaagcagag aatgtcacaa aaggggtctg ggcaatagaa cctcaagtcc tacctccact
  cacctgtgac ccactctctc ttacaaggct                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324085552	CHEV_12_70871554	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs249535348					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:69817341 () rs orientation: forward

Symbol	Name	Function Class
Cdkl1	cyclin dependent kinase like 1	within coordinates
Tssr116525	transcription start site region 116525	1260 bp upstream
Tssr116526	transcription start site region 116526	825 bp upstream