rs249582740 SNP Detail

Summary

• ID
  rs249582740
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:128785116 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CAGTTGGTG Gctcttggct ccttgctttg
  gcagctcagg aaaacctttg ctcctgagtc agaggcagtg ggagtctttt cttccaagac
  agtttttcct ttgtgaacct ctgatcccac acctcctact tccTGGCTTT CAAATATCTC
  C
  CTCTTCATAG AACTTTGAGT AGTGTCTCTT TTAGGCTCCT TTCTGTAGGC CAATTAATGA
  AAAAGGACTG GCTCTATTTG CCACATAGCT TTGGAAACTA TCAATATACG TCCACAGTTT
  GTATCCCTCC TCTGGGATGC TGCCTTTGAA                                 
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319967640	CHEV_1_130753956	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs249582740					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:128785116 () rs orientation: forward

Symbol	Name	Function Class
Rr372000	regulatory region 372000	1842 bp downstream
Rr372001	regulatory region 372001	1894 bp upstream
Rr417836	regulatory region 417836	96 bp distal