rs249634965 SNP Detail

Summary

• ID
  rs249634965
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:5856447 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTCTTTCTT TCTTTCTTTT
  TTTCCTTCCT TCCCTTTCCT TCCTCCTCCC TCCTTTCCCC TCCTCTCTCT TTCTGTTCCT
  TTTCTGGTAC TGGGTACTGA ACCAAAGGCC TTGTGCTTCA TTGCAAATGC TTTACCACTG
  AGCTAATTCC TCAGCATAGT CACAAGCTTT CAGAGAAGGA AGGCAAGGCG TGTGTAGCTC
  R
  AGAATAAGAG CAGACGTACA CTTGGCCCTG TGATGGGCTG GTCAGATTTT CTTTCTTTTT
  ATTAAACTAG TAACCCGAAC CATTTGTACA GACAAAATGT CCTTGGGATT CTTTCGCATG
  TTCTTGAAAG TGGTGCCAAG AGGGAAGAAA GTGTTTTTAT GATGGTGGAA TGGGTACCAA
  CATCTACCTA TTTAAATTTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323878276	CHEV_12_5813253	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs249634965					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:5856447 () rs orientation: forward

Symbol	Name	Function Class
Gm32442	predicted gene, 32442	within coordinates
Tssr112600	transcription start site region 112600	1746 bp upstream
Tssr112601	transcription start site region 112601	1817 bp upstream