rs249646676 SNP Detail

Summary

• ID
  rs249646676
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:18912845 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAATT GGTGGAATCT GTATGAAAAA
  A
  AGGGACTTCC CCCAAGGTCG CATGG                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322116612	CHEV_7_19764269	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs249646676					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:18912845 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18451	CpG island 18451	626 bp distal
Cpgi18452	CpG island 18452	37 bp proximal
Eml2	echinoderm microtubule associated protein like 2	within coordinates
Rr155272	regulatory region 155272	45 bp distal
Rr167138	regulatory region 167138	within coordinates
Rr167139	regulatory region 167139	1955 bp proximal
Tssr64795	transcription start site region 64795	681 bp downstream
Tssr64796	transcription start site region 64796	61 bp upstream