rs249649784 SNP Detail

Summary

• ID
  rs249649784
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:127310060 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACACT CAAATGAAAG GGAAGAAGAT
  R
  AGAGTGTCTC GCATGATTTT TATTT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322451567	CHEV_7_134854402	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs249649784					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:127310060 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19760	CpG island 19760	1671 bp distal
Ctf1	cardiotrophin 1	1848 bp upstream
Rr655876	regulatory region 655876	1465 bp distal
Rr655878	regulatory region 655878	235 bp proximal
Rr655879	regulatory region 655879	1358 bp proximal
Tssr69270	transcription start site region 69270	1821 bp upstream
Tssr75031	transcription start site region 75031	1970 bp upstream