rs249686376 SNP Detail

Summary

• ID
  rs249686376
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:120753988 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAAAATTCCA CCAGAGAACT
  CCTAAACCTG ATAAACAGCT TCGGTGAAAT AGCTGAATAT AAAATTAACT CAAACAAGTC
  AATGGCTTTT CTCTACACAA AGAATAAACA GGCTGAGAAA GAAATTAGGG AAGCAAAAAC
  CTTTCTCAAT AGTCACAAAT ATTATAAAAT ATCTTGGTGT GACTCTAACT AATGAAGTAA
  W
  AGGTCTGTAT GATAAGAACT TCATGTCTCT GAAGATATAC ATTAAAGAAG ATCTTAGAAG
  ATGGAAAGAT CTGCCATGCT CATGGATTGG CAGGATCAAT ATTATAAAAA TGGCTATCTT
  GCTAAAAGCA ATCTACATAT TCAATGCAAT ACCCATCAAA TTTCCAACTC AGTTCTTCAA
  TGAATTAGAA AGAGCAATCT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325960942	CHEV_X_118957900	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs249686376					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:120753988 () rs orientation: forward

Symbol	Name	Function Class
Rr395603	regulatory region 395603	1722 bp upstream