rs249745707 SNP Detail

Summary

• ID
  rs249745707
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:98621110 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ttaAACCAA CAAACACTAT CATGTTAGCT
  ACAACATTTT CCAAGCTTTC ATCTTGATGT CATATTTTAT ACTTTCTTGA GGTGTTTTAT
  GGTTTAAAAT GCACGATAGA AACTATTTAA ATGTCTTACA CTGATTCACT ATTTACTAGT
  S
  ATCTGAACTG ACGATCACTG ACCACGACTA AGTTCGGAGG TTATCAGATG GACATGGCTC
  CCTGtttttt ttttttgttt tttgtttttt ggtttttttt ttttGTGCTA TCtctgcttg
  actgtctgtc tgtctgtctg tctgtctgtc                                 
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319867646	CHEV_1_100589962	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs249745707					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:98621110 () rs orientation: forward

Symbol	Name	Function Class
Tssr8238	transcription start site region 8238	91 bp upstream