rs249762094 SNP Detail

Summary

• ID
  rs249762094
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:60690487 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCTTATGTG AGGCAGACAT
  AAATGAATGC AGCAGCACCC CCAGACAATT TGGGGAGGAA TGTGCCGAGA TGTCCTTAGA
  GGATCAATAG GGACACACAG CAGGCCTGCC TTCCTCCTTG AACTACCTTG AAGCATCAGG
  CTGTTTGTAT CTGTCAGCCT GGATTCAGAC AGGAACCAAG CATAACTGTC CTCTGAAAGG
  Y
  TCCACCCAGC AGCTGACCAA AACAGATGCT GAGACCTACA GCCAAACATT AGATGGGGAG
  CTTGGGAAGT CATGTGGAAG AGTTTGGAGA AAGACTGAAG AACCCAAAGA AAGGGGCTAG
  ATATTCCATA GAAGACCAGC AGAGTTAACT GCTTATCTGT GGATCCTGTT CCCCTAACTG
  GGTTGCCTTA TCTGGCTTCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324986727	CHEV_15_60650193	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs249762094					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:60690487 () rs orientation: forward

Symbol	Name	Function Class
Lratd2	LRAT domain containing 1	358 bp downstream
Tssr134471	transcription start site region 134471	1078 bp downstream
Tssr134472	transcription start site region 134472	1202 bp downstream
Tssr134473	transcription start site region 134473	1499 bp downstream