rs249778056 SNP Detail

Summary

• ID
  rs249778056
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:3671063 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTGATGTGT CTATTAGCAT
  GCCAAAAACA CATCGTTGGC CTTTTTAGGA TCACTCAGTA CCTGTGGCTC CTCCCAGCAC
  TTCTTGCCCA GCCTCCTACC CTGAAGCTCT GCAGCCTAGA GGCTCCCCCC CGCCCCCTTC
  TGCCTTCCCA TTCTATATAT AAATCTGCCA TTTTGGCCAT GAGCTCTCTT GACTCTCTTC
  M
  TTCTCTTTTG GTCTTCTTTC TTGTCTCTTT CTCTTCTTTC TCTTCCACTC TCTGACTTCT
  CTCTCCTCTC ATGGCCCTGT TCAGGTTTGC TAGCTATGTT CAATCTGCTT TTTTCTCTCC
  TTGCTCTGGG ATCTTCCAGA TGTCTCTGGC TGTTCTCTCC TTCATATCTA CAACAAAAAC
  TATATCTAGG AGGGTCATGT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320204863	CHEV_2_3587298	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs249778056					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:3671063 () rs orientation: forward

Symbol	Name	Function Class
Gm50615	predicted gene, 50615	within coordinates
Rr372694	regulatory region 372694	within coordinates