rs249914793 SNP Detail

Summary

• ID
  rs249914793
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:175795130 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGTTATAAA GGTTGAAATA
  TCCAGAATGT AGTGTCTCCC TCTCCCTCTC CCTCCCCCCT CCCCCCCTCT CGTGTGTGTG
  TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGAGTG TGTGTGTGTG TGTCTTAGGG
  TGCCAGAGAG CTCAGCTTCT TGGTAGGCAG CCTTAGGCAT CTTTGAGCAC CTTCAGTTAA
  M
  CTCCCCACCC CTCCTTAGCT GTCTAGTTGC TCAGACACCT TCCAAACAAA ATTTCCAAGC
  TTAACTCAGA TACACTGGTG GAGACTATAA AATGAGAAAG ATCATGCTGT CTGAAGTGTC
  TTCGGGACAT CTCATACAAA CTTAATGGAG TTATACTCCC ATGTCCTGAG ATTTTTTTCT
  TGGTTCCACA CTATCAATGA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320153316	CHEV_1_177897695	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs249914793					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:175795130 () rs orientation: forward

Symbol	Name	Function Class
Pld5	phospholipase D family member 5	Intron
Rr423868	regulatory region 423868	929 bp distal