rs249945595 SNP Detail

Summary

• ID
  rs249945595
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:84469791 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GAGGGTTGCT GGGAGTCTGT GGCTCTCCTG ATCCACAGTG
  TGAGAGAAAA GATAAAAGGA AGTTGCAGAC CATGTGTGCT ACTGGGGCTG GAGAGATGGA
  Y
  CACTGGTAGA TGAGAACACT GGCTGCTCTT CGGAAACAGG GTTAGATTCC CAGAATTCTG
  TAACTCCAGT CCCAGGGGAG CCGATGCTAT CTTCTGGTC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322745693	CHEV_8_86267061	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs249945595					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:84469791 () rs orientation: forward

Symbol	Name	Function Class
Adgre5	adhesion G protein-coupled receptor E5	1979 bp upstream
Cpgi20655	CpG island 20655	1472 bp distal
Gm46046	predicted gene, 46046	within coordinates
Tssr2620	transcription start site region 2620	1865 bp downstream
Tssr2621	transcription start site region 2621	597 bp downstream
Tssr78297	transcription start site region 78297	1728 bp downstream
Tssr82052	transcription start site region 82052	1972 bp upstream