rs249961146 SNP Detail

Summary

• ID
  rs249961146
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:4030253 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AATAG AGTGCTCGGC TGCACCCCCC
  M
  CTCCTGAGTG TTCTCACCAG GAGGC                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323873061	CHEV_12_3980253	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs249961146					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:4030253 () rs orientation: forward

Symbol	Name	Function Class
Cpgi4371	CpG island 4371	1292 bp proximal
Efr3b	EFR3 homolog B	within coordinates
Gm59670	predicted gene, 59670	1402 bp upstream
Rr265366	regulatory region 265366	947 bp proximal
Rr267334	regulatory region 267334	1853 bp distal
Rr403219	regulatory region 403219	1112 bp upstream