rs249964782 SNP Detail

Summary

• ID
  rs249964782
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:127722400 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTTGTTTT TTGTTTTTTG
  TTTTTTGTTT TTTTGAGACA GGGTTTCTCT GTATAGCCCT GGCTGTCCTG GAACTTGCTT
  TATAGACCAG GCTGGCCTCG AACTCAGAAA TCTGCCTACC TCTGCCTCCC AAGTGCTGGG
  GAGACCATTT TGTCTTGCAG CTAGCAAGAA ATCTAACTCA GTTTGCTACA GTGGTATACT
  R
  CAGAGGTATA CTGTATACTG TATAATGATG TATAATGTAT AAGGTCTAAG GTAAAGTCTA
  CAGATTGGGC TGTCATCAAA ATGGTATATA AACCTATCTA GAAAAAAAGA AAAAAAAACT
  GTCTAGAACC CTCAGACTCT CCAAAAGTCA CCCTGTGACA ATCTGCCAAG CCCCATGACT
  GGCAGGGCTA ACCTGTCCTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323530325	CHEV_10_127323587	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs249964782					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:127722400 () rs orientation: forward

Symbol	Name	Function Class
Rdh7	retinol dehydrogenase 7	within coordinates
Rr218503	regulatory region 218503	1400 bp distal
Rr226506	regulatory region 226506	within coordinates
Rr226507	regulatory region 226507	1992 bp proximal
Tssr99825	transcription start site region 99825	1297 bp upstream