rs249987710 SNP Detail

Summary

• ID
  rs249987710
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:40286264 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAGAATGCT TGCAGCAGGA
  GAGCTACACT TTGCTGGGGT TGGGTAGAAA ACCAGTAGTG ACCTGCAGCC AGGCTAAGAC
  TCATTGGTTA ACGTGCTTGA GCCTATGCCT AAACCTGCCA CCCACAGGAA TGGACTCCCC
  TACCCCCAGC CAGCTTGGAC AGCAGGTACT CAATGAAGGT AGGCTGCATT CCTGCAGAGC
  R
  CTTCCCCAAG CTCTCCTCCT CCTCCTCCTC CTCCTCCTCC TCCTCCTCCT CCTCCTCCTC
  CTCCTCCTCC CTCCACCCTC TTCAAGGAGT TAAAGCGCCC TCCCTGCCTA ACCCCGGGAG
  CCTTTCTCCC TTTCTCCTCC TAGGCAGCTG CACAGGCCAC CCTGCGGGGG TACCAGATTC
  CTGGTAGGAC AAAGTTTTCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322915611	CHEV_9_40182553	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs249987710					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:40286264 () rs orientation: forward

Symbol	Name	Function Class
Gramd1b	GRAM domain containing 1B	within coordinates
Rr676805	regulatory region 676805	983 bp proximal
Rr676806	regulatory region 676806	1289 bp proximal
Rr676807	regulatory region 676807	1340 bp proximal
Rr676808	regulatory region 676808	1443 bp proximal
Tssr88904	transcription start site region 88904	1153 bp downstream
Tssr88905	transcription start site region 88905	1245 bp downstream
Tssr88906	transcription start site region 88906	1364 bp downstream
Tssr88907	transcription start site region 88907	1391 bp downstream
Tssr88908	transcription start site region 88908	1458 bp downstream
Tssr88909	transcription start site region 88909	1862 bp downstream