rs249988388 SNP Detail

Summary

• ID
  rs249988388
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:51260843 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACTGG CTGGCCTCGT TCTCAGAGAG
  R
  ACCTGCCTGC CTCTGCCTGC TGCTG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320762371	CHEV_3_51157344	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs249988388					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:51260843 () rs orientation: forward

Symbol	Name	Function Class
Rr576282	regulatory region 576282	within coordinates
Rr576283	regulatory region 576283	131 bp proximal
Rr576284	regulatory region 576284	790 bp proximal
Rr576285	regulatory region 576285	1842 bp proximal