rs250077799 SNP Detail

Summary

• ID
  rs250077799
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:103213489 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAATCAGATT ACCTGGAACT
  AAAATTACAG GTGGTTGTAA AATGTCCTGG GGGTGAGTTG AACACAGGTC CTATTGGAGA
  ACAGCCAGTG CTTTTAATCT CTAAGCCATC CAGCTCTACA TAGTTCTTTT TAATTTAACC
  AGTTAATTTA TTATATATTT ATTTTACTTT TAAAATGAAC ATGTGTATGG GTATGTTTAT
  K
  TGTATACTGG TTGTGCCTGA GGAGGCTGAA GGTATTGGCT TACCCAGAAC TAGTTACAGA
  TGGTTGTGAG CCACCTGATG TAGGTACTGG CAACCAAATT CAGGTCCTTT TCAAGAGCAA
  CACGTGCTCT TAACCATTGA TCCATCTCTC TAGCCCTTTA ATTTAATTTT AAAAAAAAAC
  ACTTATTTAG GTGTATGTGT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320856884	CHEV_3_103110096	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs250077799					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:103213489 () rs orientation: forward

Symbol	Name	Function Class
Rr69850	regulatory region 69850	289 bp distal
Rr69851	regulatory region 69851	1712 bp proximal
Trim33	tripartite motif-containing 33	within coordinates