rs250098745 SNP Detail

Summary

• ID
  rs250098745
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:95035411 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCCGA GGTCATTCCC ACCCCCCCGC
  S
  CCCGTCACAC ACACACACAC ACACA                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320841126	CHEV_3_94932022	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs250098745					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:95035411 () rs orientation: forward

Symbol	Name	Function Class
Rr580821	regulatory region 580821	1082 bp proximal
Scnm1	sodium channel modifier 1	1619 bp downstream
Tmod4	tropomodulin 4	Intron
Tssr30493	transcription start site region 30493	1901 bp downstream
Tssr30494	transcription start site region 30494	1887 bp downstream
Tssr30495	transcription start site region 30495	1873 bp downstream
Tssr30496	transcription start site region 30496	1851 bp downstream
Tssr30497	transcription start site region 30497	640 bp downstream