rs250115187 SNP Detail

Summary

• ID
  rs250115187
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:60596141 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTGAGGACT GGTCTTGTCA
  GGAGAGAGCT GGTCTCTCCA GGAGTGTTGA CACAGGATTA CAGACTCATA GGAGGAACAA
  GCTCCAGCCA GAGACAGCTA GAATATCTAA CACCAGAGAT TACCAGATGA CGAAAGGCAA
  ATTTAAGAAT CTTATCAACC GAAACCAAAA CTATGTGGCA TCGTCAGAAC CCAGTACTTC
  W
  ACCACAGCAA GTCCTGGATA GCCCAACACA CTGGAAAAGC AAGATTCAGA TTTAAAATCA
  TATTCCATGA TGCTCATAGA GGATTTTAAG AAAGACATTA ATAACTCCCT TAAAGAAAGT
  CAGGACAACA CAGCTAAATA GGTAGAAGCC CTTAAAGAAG AAACACTAAA ATCACTTAAA
  GAATTACAAG AAAAGAAACC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324062258	CHEV_12_61650342	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs250115187					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:60596141 () rs orientation: forward

Symbol	Name	Function Class
Gm6068	predicted gene 6068	1457 bp upstream
Rr387289	regulatory region 387289	1024 bp upstream