rs250132313 SNP Detail

Summary

• ID
  rs250132313
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:20988602 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    gcacagact gccctcgaga cgacacgagt
  gtagccagct ttgagcttct gctccttctg cctctggctc ctaagtagct gggaatgtaa
  gcctgcacca gcaaacctgg tGATGGATTT CAGTCTAGAC TTCAAGTCTG TAAGTAAGAA
  R
  TTAGCCATGC TAATAACAAA AGTAGGTATG CCAGACATTT GTTTGTGGTG CTGTCGAGGA
  CAGATAGGCA GATAAAGGGA AGTCATGGTT AAAAAGCTAG GACCCATAAT GGTCTCACAA
  CATGTCAGGA CTTCCCATGG CACACCATAC                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319654654	CHEV_1_20908459	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs250132313					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:20988602 () rs orientation: forward

Symbol	Name	Function Class
Paqr8	progestin and adipoQ receptor family member VIII	within coordinates
Rr407023	regulatory region 407023	1580 bp proximal
Tssr6058	transcription start site region 6058	524 bp downstream
Tssr6059	transcription start site region 6059	519 bp downstream