rs250159341 SNP Detail

Summary

• ID
  rs250159341
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:66989277 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCTATCTAA TTTATATGGG
  TACGTTCTCT TCAGACACAC CAGAAGAGGG CATGAGATCC CATTGCAGAT GGTTGTGAGC
  CACCATGTGG TTGCTGGGAA TTGAACTCAG GACCTCTGGA AGAGCAGTCA GTGCTTTTAA
  CCGCTGAGCT ATCTCTCCAA CCCAGCAAGT TGTTGTTTTG AGTCTCTATA CTATGTCTTA
  K
  CTCTGAGAAG CAGAGGTCTT TAGAGTTACA GAGAGCTAAC GACAGGCATC TAGTGGGCGC
  TTCACATTCC CAGGAGCCTG TGCAGAGGCA GGCGTTCAGA TGCAATGCGA GCTCATTTCA
  TTGCAGAAGA GATAGCAGAT CTCACTGAAC AGATTGCCGA GAACGGTAAA AGCATCCATG
  AGCTAGAGAA ATCCAGAAAA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323718360	CHEV_11_66911953	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs250159341					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:66989277 () rs orientation: forward

Symbol	Name	Function Class
Mir6923	microRNA 6923	1353 bp upstream
Myh3	myosin, heavy polypeptide 3, skeletal muscle, embryonic	within coordinates
Rr449421	regulatory region 449421	1837 bp proximal
Rr449422	regulatory region 449422	1914 bp proximal
Tssr102156	transcription start site region 102156	503 bp downstream
Tssr102157	transcription start site region 102157	117 bp upstream