rs250185157 SNP Detail

Summary

• ID
  rs250185157
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr7:108534924 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGAAGTGAAG CCCTCAGTGG
  TTTGGTCACC TGCCTGTGGG GCAGGACTCA CAGGGAGCTG AGAAGACTCC TCCAGGCTGG
  TCTCTGCAGA GGCCCATGAC CAGCACTCAT TCCAGAGCCG AGGCAGGGGA AACTAGAGAA
  CATGCCTGCT TTGTGGAAAG TAGTAGACCT GAGTTGGGCC TGGACAGCAG ATTGAGGGCT
  R
  AAGCAGAGCA CCTGCAAAGG GGAGGCAGAG AGAGGCAGAG AGTGGACGCA AGGAAATAGA
  GCTCGCAGGT CAAGGCGTGA CAGAACTGCA GCATGAGAGG GGTTTGGGTG AGTTCTAGAG
  CTGCCGTTGT GCATACAAGA AGAAAGGACA GAGTGTGGCT TGGGCTTGGT ATTCCTTGTG
  AGGTGCCCCT GAGTGTACCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322388648	CHEV_7_116079231	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs250185157					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:108534924 () rs orientation: forward

Symbol	Name	Function Class
Eif3f	eukaryotic translation initiation factor 3, subunit F	Intron
Rr400539	regulatory region 400539	1259 bp downstream
Rr652952	regulatory region 652952	1290 bp distal
Rr652953	regulatory region 652953	1547 bp distal
Tssr68456	transcription start site region 68456	1287 bp downstream
Tssr68457	transcription start site region 68457	1189 bp downstream