rs250213549 SNP Detail

Summary

• ID
  rs250213549
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:134096410 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGTTGACTGC CTTGATACTG CACTCGGGGC CTGTGTGGGC
  AGAACTGCTG TGAGTCTGTG CATGGGCCTT TCTTCTCTTG TCCTGGCCAA ACTTCTTCTT
  G
  ACTTCTGGCT CTTAACAGTC TGTCCACTCC CTCTTTCTCT GGCTCTTAAC AGTCTGTCCA
  CTCCCTCTTT CTTCTGAGAT GATCCTAGAG GGTGGCAGA                       
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321976678	CHEV_6_134069465	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs250213549					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:134096410 () rs orientation: forward

Symbol	Name	Function Class
D6Mit374a	DNA segment, Chr 6, Massachusetts Institute of Technology 374a	3 bp proximal
D6Mit374b	DNA segment, Chr 6, Massachusetts Institute of Technology 374b	37 bp proximal
Etv6	ets variant 6	within coordinates
Rr639573	regulatory region 639573	within coordinates
Rr639574	regulatory region 639574	1091 bp proximal