rs250214926 SNP Detail

Summary

• ID
  rs250214926
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:32877213 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTTACCTCT GCCTGGTTAT
  GTCTTCATTC TTTCACAAAA GTAATGGAAA GCACAGTCTA AGTGCTGGCC ACAGCTGGTC
  AAATAGGAAA GGCATGGTCT GCATGTGCAT CTTCATACTA AAGTACATTG ATGTCTCACA
  AGCAGACATG TGGTCTTTTA CTAGGCACCA AGGTTGATGA TATACAGCTT TTTAAAAAAT
  R
  TATAATAACC AATGTACAGA ATAGTAAACA TTATTTTAAA TGCTGTCCAT TTTTCACAGA
  AGAACAAGAA GGGCCCTGAC CTGTTCTGCC TGGATCCCAT CTGCTGCTAG CCCATCTTAG
  CCTTGCTCTC ACATACCTTC CCTCCTCACT CCATATCCTA GCCCAGCCCA GCCCAGCCCA
  GCCCAGCCCA GCCCAGCCCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325362704	CHEV_17_32795184	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs250214926					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:32877213 () rs orientation: forward

Symbol	Name	Function Class
Cyp4f40	cytochrome P450, family 4, subfamily f, polypeptide 40	661 bp upstream
Gm65897	predicted gene, 65897	within coordinates
Tssr143725	transcription start site region 143725	639 bp upstream
Tssr143726	transcription start site region 143726	727 bp upstream
Tssr143727	transcription start site region 143727	750 bp upstream
Tssr143728	transcription start site region 143728	770 bp upstream
Tssr143729	transcription start site region 143729	782 bp upstream
Tssr143730	transcription start site region 143730	805 bp upstream
Tssr143731	transcription start site region 143731	827 bp upstream
Tssr143732	transcription start site region 143732	841 bp upstream