rs250243093 SNP Detail

Summary

• ID
  rs250243093
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:76886290 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GTTCAAAGC CTGatgcttg tataattcca
  gcactaggaa ggctacctca gtctggcagt aagttttcaa agtcaagacc agcctggact
  acacaagcag atgttccttg aaaacctgaa ggtcgcatCC CCCTGACTCC TATCTATAAA
  Y
  GCCCTTGCTA GTTTCCACAT CAACGGCTCA CACCCTCCCT CCTTTTAGAA AAGCCCAAGC
  AGTCATTAAG CATGCACAGC AAGTGCCGCT CACATCACTA AAGCGACAAG TATTTTATTT
  CAACATTTCC AAGTTGCTCA TGAGGCCCGG                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323754472	CHEV_11_76808966	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs250243093					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:76886290 () rs orientation: forward

Symbol	Name	Function Class
Cpgi3300	CpG island 3300	1676 bp proximal
Gm72068	predicted gene, 72068	1606 bp upstream
Rr247222	regulatory region 247222	1710 bp proximal
Rr251643	regulatory region 251643	1929 bp distal
Rr366811	regulatory region 366811	698 bp upstream