rs250249553 SNP Detail

Summary

• ID
  rs250249553
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:124021326 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCTCTGCTC TGTGGAAAAC
  TTACTGTAAC AGAGTTTATC ACAAACAATC CCCAGGAATA GAAGACACTG TGAGAGTAGG
  AGAAGCCATC ACATACATTT ACTTCCTCAT ACTTATTGGA AAAAAAAATA TGGATAGTCT
  AGTTCAAAGT GGGGATGAAT CAAATACAGG TACAGATATT CAATAGGAAA CAATTTCATT
  K
  TATCTTATTG ATTTTTGTCC TTTTTATAAA AAAGAAAATG AAGTATCTAC AACTTGTTCC
  TAAGACCTGT ACACAATGAA AATATAATGA TCTATGAGTA GGACATTGGA AAGAAATAAA
  AATGCACCAA AGTATGTTTA ATCAGCTGGC AAGAGCCCCC TTTTTTTGTT CTGTCTTGAC
  AGAAACTGTG GGAGGGCAAA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320926433	CHEV_3_123930595	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs250249553					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:124021326 () rs orientation: forward

Symbol	Name	Function Class
Rr584579	regulatory region 584579	1477 bp distal