rs250291009 SNP Detail

Summary

• ID
  rs250291009
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:107181364 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TTAACACTC TCCACTCTCT AATAACTCAG
  CAGGCTTATA CATCCTCCTT CCAGCCCTCA CCCCCTACAA GTGAACACAC ACACACACAC
  TCCTTAGGCC CTTCATTTTG CAGTTTTCTG TGGCCTTGGT GCCCCCTAGT GGCTCATTAG
  K
  GTTCATTGCA CTGAAGGCTT GTGACTAAGC ACTCGAGTTG TCCAGAGGCC AGTGTTGGTA
  GCCCTGGGAT AACACATCTC TCAGTGCCCA GAGCTGGACC CACCATTAAA GATACCCCCC
  ATCTTCTTTT TATTttttat tatttttgac                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320865153	CHEV_3_107076966	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs250291009					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:107181364 () rs orientation: forward

Symbol	Name	Function Class
Rr582951	regulatory region 582951	within coordinates
Rr582952	regulatory region 582952	4 bp distal