rs250301210 SNP Detail

Summary

• ID
  rs250301210
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:55796699 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAAAA AACCACCACC ACCACCAACA
  M
  CAACAACAAC AACAAAAAAA ACCCT                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325189955	CHEV_16_55976449	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs250301210					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:55796699 () rs orientation: forward

Symbol	Name	Function Class
Cpgi8325	CpG island 8325	1506 bp distal
Gm28037	predicted gene, 28037	within coordinates
Rr517159	regulatory region 517159	1229 bp distal
Tssr138803	transcription start site region 138803	1129 bp downstream
Tssr141546	transcription start site region 141546	1811 bp upstream
Tssr141547	transcription start site region 141547	1729 bp upstream
Zbtb11	zinc finger and BTB domain containing 11	within coordinates
Zbtb11os1	zinc finger and BTB domain containing 11, opposite strand 1	1719 bp upstream