rs250339193 SNP Detail

Summary

• ID
  rs250339193
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:96143107 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGGATAATT GAAGTGATAT
  GTTTCACTTT GTCTGAAAAA AATCATAAGC TTAGGTTGGT TGCTCATGGA AAAAAGGGTG
  ATGTTTATTT GCTGGAAAGA GCAGGAAGGA AGATAATATG AACATAATGA AAGCAGTCGT
  ATACTTTTTA AAAGTAAATC AGATTCATTA TGAATAAAGT ATAAACAAGT AACACAAAGG
  R
  GAATTCTGTG TTCTTATATA ATTTTCACTT ATACATATTA TAGCTACTCT TTTTGGGGCG
  GGGGGACCTA TATGGTCTTA TATGTAGCTC AGTCTGTTAG AACTTTGGAG GTGGGGGTGG
  GGGTGGAGGC AGGTACAAGG TTGCACTATG TAGCTCTGAC TGGCTTGGAA CTCAGCTCGA
  CCTCCCTCTG CCTCTCTCAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323107378	CHEV_9_96161473	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs250339193					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:96143107 () rs orientation: forward

Symbol	Name	Function Class
Tfdp2	transcription factor Dp 2	within coordinates
Tssr2975	transcription start site region 2975	1820 bp downstream
Tssr86595	transcription start site region 86595	1793 bp downstream
Tssr86596	transcription start site region 86596	1777 bp downstream