rs250403754 SNP Detail

Summary

• ID
  rs250403754
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:34932192 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AAGAGGCTGC GTTGGGGGCC TTGGAGAGGC TGAGCCAAAG
  ATGGTAACAG GAGTTCTTCC AGAGAGATGA CACACTGACT GAAAGATCTC TGATGGGATG
  R
  GTTTCCCCAC AGACTACCCG GGAAACAGCA TTCCGAGCCC CCACCACCCT AAATTCAAAG
  TCTCTGAGGC AGGAAGACCT GTGTAGGTTT TTAAGGAGC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322156689	CHEV_7_36017786	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs250403754					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:34932192 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18864	CpG island 18864	1792 bp proximal
Gm38989	predicted gene, 38989	within coordinates
Rr645337	regulatory region 645337	162 bp proximal
Rr645338	regulatory region 645338	988 bp proximal
Rr645339	regulatory region 645339	1864 bp proximal
Rr645340	regulatory region 645340	1926 bp proximal