rs250421277 SNP Detail

Summary

• ID
  rs250421277
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:97147725 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCCCAGCTG ACATTTGGTT
  GGCATTCAGT GACGTTTTCA TGAATGAAAC CGAGTGACAG GATACGTATT CTAGATGGCA
  ATGGTCTCAG TCTGCTGGTT CTTGTTGCTT ACACTTCATA AAGCTTGTCT TGAAGGCAGG
  GGACCCTGAC AAATGTTAGA GTCCTGGATC CAGCCATGCC TGAAAGCCAC CAAATGCTTT
  Y
  ATTTAACTGT ATTCTCTACT GATCTTTGTT TTGGGTACAC TGTTCTGCGT TGTGCCTTTG
  TCCCTTGTGA CTGACCTAGT CCTGGTGCCC TCAGTGGAGG TGTGAGTTGT CTATGTGTTC
  TTATGTGCCA GACCAAGCTA GCCTGCATAC GGTAGCTCAT TCATTGTTCA CCGAACCCTA
  CAGTGATACT GTCCCATAAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325076416	CHEV_15_97080275	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs250421277					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:97147725 () rs orientation: forward

Symbol	Name	Function Class
Cpgi7616	CpG island 7616	1785 bp distal
Gm57814	predicted gene, 57814	682 bp upstream
Pced1b	PC-esterase domain containing 1B	within coordinates
Rr305670	regulatory region 305670	325 bp distal
Rr308785	regulatory region 308785	within coordinates
Rr308786	regulatory region 308786	1676 bp proximal
Rr312356	regulatory region 312356	924 bp distal