rs250431468 SNP Detail

Summary

• ID
  rs250431468
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:86576709 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTTAT TAATAATGAG CACAAGTCAC
  Y
  CATAACATGA CTAGAGAGAA ATGCT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323057511	CHEV_9_86588689	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs250431468					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:86576709 () rs orientation: forward

Symbol	Name	Function Class
A330041J22Rik	RIKEN cDNA A330041J22 gene	804 bp upstream
Cpgi22104	CpG island 22104	557 bp proximal
Me1	malic enzyme 1, NADP(+)-dependent, cytosolic	within coordinates
Rr197818	regulatory region 197818	1509 bp distal
Rr206830	regulatory region 206830	within coordinates
Tssr90786	transcription start site region 90786	984 bp downstream
Tssr90787	transcription start site region 90787	1014 bp downstream
Tssr90788	transcription start site region 90788	1115 bp downstream
Tssr90789	transcription start site region 90789	1182 bp downstream
Tssr90790	transcription start site region 90790	1241 bp downstream